Well, for those of you guys that are interested I finally got this issue fixed and I was able to capture the handshake in airodump-ng on the monitoring interface.
The solution was just dumb luck as I figured as I was perplexed about how the interface could see the traffic but the application could not, so... i did what came to me and updated the application... well all of them
Here are the commands I used to update the aircrack package and grab any other apps that needed updates:
# apt-get update
# apt-get upgrade all
Yea pretty silly of me, but hey i would rather be luck than good sometimes.
I hope this thread helps someone else out in the future.